Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | ISP_001803 | Not Available | Negative | 1887549 - 1888757 | 39805.9 |
| 2-hydroxyacid dehydrogenase | ISP_001804 | A1RYE4 | Positive | 1888823 - 1889731 | 32420.4 |
| doxx family membrane protein | ISP_001805 | P96694 | Positive | 1889769 - 1890344 | 19857.4 |
| dihydroxy-acid dehydratase | ISP_001806 | Q5YRV8 | Negative | 1890619 - 1892463 | 64823.1 |
| ph domain-containing protein | ISP_001807 | P0A5P3 | Negative | 1892587 - 1893108 | 19012.3 |
| acetolactate synthase large subunit | ISP_001808 | P9WG40 | Positive | 1893363 - 1895255 | 67180.1 |
| acetolactate synthase small subunit | ISP_001809 | A0QUX7 | Positive | 1895257 - 1895763 | 18257.4 |
| ketol-acid reductoisomerase | ISP_001810 | A4FMQ5 | Positive | 1895800 - 1896813 | 36464.2 |
| duf397 domain-containing protein | ISP_001811 | Not Available | Positive | 1896893 - 1897174 | 10435.0 |
| nuclear transport factor 2 family protein | ISP_001812 | Q9HYR3 | Negative | 1897171 - 1898052 | 32045.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
