Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase | ISP_001783 | P9WQ70 | Positive | 1866709 - 1867905 | 41357.2 |
| trna 2-thiouridine(34) synthase mnma | ISP_001784 | A4FMT5 | Positive | 1867910 - 1869001 | 38483.6 |
| 13e12 repeat family protein | ISP_001785 | P72042 | Negative | 1869009 - 1870283 | 46301.2 |
| gnat family n-acetyltransferase | ISP_001786 | Q8ZKE6 | Negative | 1870481 - 1870933 | 16664.9 |
| gnat family n-acetyltransferase | ISP_001787 | P16691 | Negative | 1870944 - 1871345 | 14625.6 |
| mbl fold metallo-hydrolase | ISP_001788 | P75849 | Negative | 1871425 - 1872468 | 38012.0 |
| duf2510 domain-containing protein | ISP_001789 | Q9UT84 | Negative | 1872574 - 1873398 | 30528.1 |
| methionine synthase | ISP_001790 | Not Available | Positive | 1873520 - 1874557 | 36269.4 |
| hypothetical protein | ISP_001791 | Not Available | Positive | 1874641 - 1875345 | 25865.3 |
| nad-dependent dna ligase liga | ISP_001792 | A4FMS5 | Positive | 1875357 - 1877537 | 79867.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
