Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ISP_000162 | Not Available | Negative | 169604 - 169759 | 5545.98 |
| type i pantothenate kinase | ISP_000163 | Q0S4A2 | Negative | 170043 - 170975 | 35476.8 |
| macro domain-containing protein | ISP_000164 | O67112 | Negative | 171088 - 171708 | 21557.7 |
| prephenate dehydratase | ISP_000165 | Q44104 | Positive | 171807 - 172715 | 31932.7 |
| histidine phosphatase family protein | ISP_000166 | Q79FW5 | Positive | 172727 - 173329 | 21187.1 |
| duf4232 domain-containing protein | ISP_000167 | Not Available | Positive | 173447 - 174088 | 21110.8 |
| hypothetical protein | ISP_000168 | Not Available | Negative | 174111 - 174587 | 16518.6 |
| mfs transporter | ISP_000169 | O31561 | Negative | 174627 - 175874 | 42317.5 |
| metallopeptidase family protein | ISP_000170 | Not Available | Negative | 175976 - 176326 | 13092.4 |
| septum formation family protein | ISP_000171 | P9WKW4 | Negative | 176326 - 177354 | 35506.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
