Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | ISP_001703 | P9WHW0 | Positive | 1786931 - 1787656 | 25520.4 |
| plp-dependent aminotransferase family protein | ISP_001704 | Q8NS92 | Negative | 1787929 - 1789311 | 48583.0 |
| carboxymuconolactone decarboxylase family protein | ISP_001705 | P96684 | Positive | 1789358 - 1789819 | 16902.1 |
| isocitrate lyase/phosphoenolpyruvate mutase family protein | ISP_001706 | P9WLN8 | Positive | 1789816 - 1790553 | 24755.4 |
| cation acetate symporter | ISP_001707 | Q8NS49 | Negative | 1790620 - 1792227 | 55432.9 |
| duf485 domain-containing protein | ISP_001708 | P0AF54 | Negative | 1792224 - 1792586 | 13702.4 |
| cation acetate symporter | ISP_001709 | P39599 | Negative | 1792657 - 1794381 | 60017.6 |
| hypothetical protein | ISP_001710 | Not Available | Negative | 1794381 - 1794728 | 13127.4 |
| lyttr family dna-binding domain-containing protein | ISP_001711 | P26275 | Negative | 1794754 - 1795509 | 27025.7 |
| histidine kinase | ISP_001712 | P0AD15 | Negative | 1795506 - 1796552 | 37491.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
