Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excalibur calcium-binding domain-containing protein | ISP_000152 | Not Available | Positive | 158899 - 159381 | 16479.7 |
| class f sortase | ISP_000153 | Not Available | Positive | 159378 - 160028 | 22226.5 |
| helicase-associated domain-containing protein | ISP_000154 | Not Available | Negative | 159998 - 162274 | 80044.2 |
| excalibur calcium-binding domain-containing protein | ISP_000155 | Not Available | Negative | 162289 - 163092 | 26540.5 |
| 3'-5' exonuclease | ISP_000156 | P9WLJ0 | Positive | 163284 - 164669 | 46747.1 |
| duf3024 domain-containing protein | ISP_000157 | Not Available | Positive | 164740 - 165078 | 12859.3 |
| nucleotide pyrophosphohydrolase | ISP_000158 | Q32KY6 | Negative | 165075 - 165392 | 11778.9 |
| nitrate- and nitrite sensing domain-containing protein | ISP_000159 | Not Available | Positive | 165528 - 166448 | 32909.8 |
| hypothetical protein | ISP_000160 | Not Available | Positive | 166576 - 167865 | 47491.1 |
| hypothetical protein | ISP_000161 | Not Available | Positive | 168092 - 169600 | 54743.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
