Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | Lepetit ME/83, Lepetit ME83/973, Schering 368 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Amycolatopsis mediterranei Lepetit ME/83, Lepetit ME83/973, Schering 368, Chromosome
Gene Summary
Adenine Count
1464516 bp
Thymine Count
1458769 bp
Guanine Count
3632108 bp
Cytosine Count
3642717 bp
Genome Length
10606055 bp
Protein-coding Genes
9533 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4328 domain-containing protein | ISP_000122 | Not Available | Positive | 126638 - 127675 | 37570.9 |
| tetr/acrr family transcriptional regulator | ISP_000123 | Not Available | Negative | 127672 - 128262 | 22443.7 |
| dha2 family efflux mfs transporter permease subunit | ISP_000124 | P9WG89 | Positive | 128358 - 129704 | 45399.6 |
| mycothiol conjugate amidase mca | ISP_000125 | A0R2W9 | Positive | 129701 - 130543 | 30697.1 |
| cytochrome p450 | ISP_000126 | O87605 | Negative | 130716 - 131882 | 41804.3 |
| duf5926 family protein | ISP_000127 | Not Available | Positive | 131936 - 132817 | 31675.6 |
| duf952 domain-containing protein | ISP_000128 | Not Available | Positive | 133108 - 133461 | 12808.1 |
| sige family rna polymerase sigma factor | ISP_000129 | Q82EA9 | Positive | 133774 - 134286 | 18716.3 |
| hypothetical protein | ISP_000130 | Not Available | Positive | 134283 - 135113 | 27752.7 |
| ferritin | ISP_000131 | H8F1Z2 | Negative | 135180 - 135734 | 20909.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
