Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| msmeg_4193 family putative phosphomutase | K1T34_44565 | D3DFG8 | Positive | 9225757 - 9226467 | 24966.1 |
| m3 family metallopeptidase | K1T34_44570 | P24171 | Positive | 9226574 - 9228625 | 75571.2 |
| helix-turn-helix domain-containing protein | K1T34_44575 | Not Available | Negative | 9228726 - 9229250 | 19509.5 |
| alpha/beta hydrolase | K1T34_44580 | P54549 | Positive | 9229332 - 9230213 | 31706.7 |
| zinc-binding dehydrogenase | K1T34_44585 | Q3MIE4 | Positive | 9230447 - 9231439 | 33169.3 |
| sigma-70 family rna polymerase sigma factor | K1T34_44590 | P9WGG4 | Positive | 9231592 - 9232587 | 36306.1 |
| atp-binding protein | K1T34_44595 | Not Available | Negative | 9232714 - 9233307 | 21118.1 |
| malate dehydrogenase | K1T34_44600 | A4FFX3 | Negative | 9233309 - 9234298 | 34624.1 |
| marr family winged helix-turn-helix transcriptional regulator | K1T34_44605 | C5BE36 | Negative | 9234380 - 9234820 | 15624.6 |
| nuclear transport factor 2 family protein | K1T34_44610 | Not Available | Positive | 9234927 - 9235325 | 14309.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
