Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | K1T34_44465 | Q53191 | Negative | 9207203 - 9208159 | 34113.9 |
| abc transporter substrate-binding protein | K1T34_44470 | Q32IB6 | Negative | 9208168 - 9209766 | 58319.9 |
| thioesterase family protein | K1T34_44475 | Q7D3B2 | Negative | 9209814 - 9210248 | 15770.7 |
| l-carnitine dehydrogenase | K1T34_44480 | Q93RX5 | Negative | 9210241 - 9211185 | 33085.6 |
| 3-keto-5-aminohexanoate cleavage protein | K1T34_44485 | Q8RHX2 | Negative | 9211178 - 9212071 | 31663.3 |
| tetr family transcriptional regulator c-terminal domain-containing protein | K1T34_44490 | Q8UH57 | Negative | 9212071 - 9212931 | 32231.5 |
| carnitinyl-coa dehydratase | K1T34_44495 | A9MR28 | Positive | 9213101 - 9213718 | 20686.7 |
| carbon-nitrogen hydrolase family protein | K1T34_44500 | P9WJ00 | Negative | 9213715 - 9214518 | 28567.2 |
| gntr family transcriptional regulator | K1T34_44505 | Q8GAL4 | Positive | 9214651 - 9215325 | 24521.2 |
| m20/m25/m40 family metallo-hydrolase | K1T34_44510 | Q55FR8 | Positive | 9215375 - 9216697 | 47537.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
