Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | K1T34_43615 | Q52997 | Negative | 9020917 - 9022107 | 43212.9 |
| ycii family protein | K1T34_43620 | Q52996 | Negative | 9022115 - 9022468 | 12941.3 |
| duf3159 domain-containing protein | K1T34_43625 | Not Available | Negative | 9022590 - 9022799 | 7544.07 |
| duf3159 domain-containing protein | K1T34_43630 | Not Available | Negative | 9022821 - 9023102 | 10042.3 |
| dsba family oxidoreductase | K1T34_43635 | P39598 | Positive | 9023305 - 9023931 | 23157.2 |
| atp-binding protein | K1T34_43640 | Not Available | Negative | 9023957 - 9024454 | 18131.9 |
| dna glycosylase | K1T34_43645 | B2KZE7 | Negative | 9024710 - 9026081 | 49729.0 |
| sige family rna polymerase sigma factor | K1T34_43650 | Q82EA9 | Positive | 9026201 - 9026710 | 19205.7 |
| hypothetical protein | K1T34_43655 | Not Available | Positive | 9026707 - 9027378 | 23362.1 |
| cupin domain-containing protein | K1T34_43660 | Not Available | Negative | 9027383 - 9027880 | 17282.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
