Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | K1T34_42865 | P44736 | Positive | 8864844 - 8865899 | 36360.1 |
| rhamnose abc transporter substrate-binding protein | K1T34_42870 | Q5PJE4 | Positive | 8865905 - 8866978 | 37082.8 |
| l-rhamnose mutarotase | K1T34_42875 | Q8ESX3 | Positive | 8867052 - 8867390 | 12821.0 |
| l-rhamnose isomerase | K1T34_42880 | Q92S14 | Positive | 8867402 - 8868577 | 43095.8 |
| bifunctional aldolase/short-chain dehydrogenase | K1T34_42885 | P40747 | Positive | 8868580 - 8870610 | 71068.8 |
| l-fucose/l-arabinose isomerase family protein | K1T34_42890 | A1SDP0 | Positive | 8870623 - 8872074 | 51670.8 |
| rhamnulokinase | K1T34_42895 | Q8A1A3 | Positive | 8872089 - 8873549 | 50855.0 |
| (fe-s)-binding protein | K1T34_42900 | Q8ET92 | Positive | 8873546 - 8874271 | 25981.1 |
| lactate utilization protein | K1T34_42905 | Q8ET91 | Positive | 8874289 - 8875740 | 52167.8 |
| lud domain-containing protein | K1T34_42910 | Q9RT57 | Positive | 8875737 - 8876318 | 19991.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
