Amycolatopsis sp. Q1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. Q1 is a microbial species characterized by the presence of flagella, indicating its motility. This trait can be significant for its ecological interactions, as motility may enhance its ability to access nutrients or evade unfavorable conditions in its environment. The genome of Amycolatopsis sp. Q1 is composed of two replicons, which is notable as it may reflect a certain level of complexity in its genetic organization. The presence of multiple replicons can be associated with adaptability and versatility in various ecological niches. The genomic information for Amycolatopsis sp. Q1 is cataloged under the accessions CP080519.1 and CP080520.1. These accessions provide a basis for further exploration of the species' genetic makeup, potential metabolic pathways, and roles in its natural habitat. In summary, the combination of motility through flagella and the complexity associated with having two replicons suggests that Amycolatopsis sp. Q1 may possess unique adaptations that confer ecological advantages. These traits could enable it to thrive in diverse environments, interact with other microorganisms, and contribute to nutrient cycling processes. Understanding these characteristics can provide insights into the ecological roles of Amycolatopsis sp. Q1 within its specific habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. DSM 110486
StrainQ1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. Q1, Chromosome

Gene Summary

Adenine Count

1633571 bp

Thymine Count

1626861 bp

Guanine Count

3838957 bp

Cytosine Count

3857741 bp

Genome Length

10957230 bp

Protein-coding Genes

10464 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseK1T34_42865P44736Positive8864844 - 886589936360.1
rhamnose abc transporter substrate-binding proteinK1T34_42870Q5PJE4Positive8865905 - 886697837082.8
l-rhamnose mutarotaseK1T34_42875Q8ESX3Positive8867052 - 886739012821.0
l-rhamnose isomeraseK1T34_42880Q92S14Positive8867402 - 886857743095.8
bifunctional aldolase/short-chain dehydrogenaseK1T34_42885P40747Positive8868580 - 887061071068.8
l-fucose/l-arabinose isomerase family proteinK1T34_42890A1SDP0Positive8870623 - 887207451670.8
rhamnulokinaseK1T34_42895Q8A1A3Positive8872089 - 887354950855.0
(fe-s)-binding proteinK1T34_42900Q8ET92Positive8873546 - 887427125981.1
lactate utilization proteinK1T34_42905Q8ET91Positive8874289 - 887574052167.8
lud domain-containing proteinK1T34_42910Q9RT57Positive8875737 - 887631819991.7

Displaying genes 8571 – 8580 of 10591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.