Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | K1T34_40665 | P0CF79 | Negative | 8434081 - 8434980 | 33369.5 |
| transposase | K1T34_40670 | P59801 | Negative | 8434977 - 8435267 | 10952.1 |
| hypothetical protein | K1T34_40675 | Not Available | Positive | 8435425 - 8435724 | 11258.4 |
| methyltransferase domain-containing protein | K1T34_40680 | P9WK00 | Positive | 8435852 - 8436661 | 29677.7 |
| hypothetical protein | K1T34_40685 | Not Available | Positive | 8437721 - 8438167 | 16890.8 |
| non-homologous end-joining dna ligase | K1T34_40690 | A0R3R7 | Negative | 8438552 - 8439472 | 33344.1 |
| hypothetical protein | K1T34_40695 | A0R5T3 | Negative | 8439478 - 8440434 | 34072.9 |
| cupin domain-containing protein | K1T34_40700 | Not Available | Positive | 8441096 - 8441578 | 16447.4 |
| hypothetical protein | K1T34_40705 | Not Available | Positive | 8441672 - 8441842 | 6615.18 |
| alpha/beta hydrolase | K1T34_40710 | A0A2I1BT15 | Negative | 8441909 - 8442556 | 22925.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
