Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K1T34_39615 | Q11T61 | Positive | 8168614 - 8169750 | 40781.0 |
| substrate-binding domain-containing protein | K1T34_39620 | Q9I2F8 | Positive | 8169737 - 8170708 | 34385.5 |
| rok family transcriptional regulator | K1T34_39625 | P40981 | Positive | 8170768 - 8171982 | 42055.3 |
| luxr c-terminal-related transcriptional regulator | K1T34_39630 | P9WMG0 | Positive | 8172270 - 8172467 | 7410.12 |
| hypothetical protein | K1T34_39635 | T2KNA8 | Positive | 8172915 - 8176397 | 124257.0 |
| glycoside hydrolase family 78 protein | K1T34_39640 | Q82PP4 | Positive | 8176450 - 8179227 | 98616.9 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | K1T34_39645 | P27034 | Positive | 8179306 - 8181870 | 88182.4 |
| dna glycosylase | K1T34_39650 | T2KNA8 | Negative | 8183312 - 8184913 | 58127.5 |
| alpha-l-rhamnosidase | K1T34_39655 | Not Available | Negative | 8185079 - 8187322 | 77995.7 |
| substrate-binding domain-containing protein | K1T34_39660 | Q6LQB9 | Positive | 8187629 - 8188621 | 34840.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
