Amycolatopsis sp. Q1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. Q1 is a microbial species characterized by the presence of flagella, indicating its motility. This trait can be significant for its ecological interactions, as motility may enhance its ability to access nutrients or evade unfavorable conditions in its environment. The genome of Amycolatopsis sp. Q1 is composed of two replicons, which is notable as it may reflect a certain level of complexity in its genetic organization. The presence of multiple replicons can be associated with adaptability and versatility in various ecological niches. The genomic information for Amycolatopsis sp. Q1 is cataloged under the accessions CP080519.1 and CP080520.1. These accessions provide a basis for further exploration of the species' genetic makeup, potential metabolic pathways, and roles in its natural habitat. In summary, the combination of motility through flagella and the complexity associated with having two replicons suggests that Amycolatopsis sp. Q1 may possess unique adaptations that confer ecological advantages. These traits could enable it to thrive in diverse environments, interact with other microorganisms, and contribute to nutrient cycling processes. Understanding these characteristics can provide insights into the ecological roles of Amycolatopsis sp. Q1 within its specific habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. DSM 110486
StrainQ1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. Q1, Chromosome

Gene Summary

Adenine Count

1633571 bp

Thymine Count

1626861 bp

Guanine Count

3838957 bp

Cytosine Count

3857741 bp

Genome Length

10957230 bp

Protein-coding Genes

10464 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseK1T34_36165P9WKF8Negative7458127 - 745958750563.0
squalene--hopene cyclaseK1T34_36170P33247Negative7459596 - 746151870827.2
polyprenyl synthetase family proteinK1T34_36175P0A5H9Negative7461519 - 746256836263.1
hydroxysqualene dehydroxylase hpneK1T34_36180O49901Negative7462565 - 746391747786.0
presqualene diphosphate synthase hpndK1T34_36185P65861Negative7463914 - 746477131248.4
squalene synthase hpncK1T34_36190P65861Negative7464768 - 746564331686.6
helix-turn-helix domain-containing proteinK1T34_36195P49694Positive7465798 - 746699444227.7
sdr family nad(p)-dependent oxidoreductaseK1T34_36200Q3T0R4Negative7467155 - 746791326100.5
duf3159 domain-containing proteinK1T34_36205Not AvailableNegative7467913 - 746857824008.2
dmt family transporterK1T34_36210P42459Positive7468697 - 746965032362.0

Displaying genes 7231 – 7240 of 10591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.