Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rieske (2fe-2s) protein | K1T34_31870 | Q9F722 | Negative | 6563345 - 6563782 | 14185.8 |
| hypothetical protein | K1T34_31875 | Not Available | Positive | 6563910 - 6564314 | 14328.6 |
| sigma-70 family rna polymerase sigma factor | K1T34_31880 | H8EXN1 | Positive | 6564357 - 6564842 | 17936.1 |
| dna glycosylase | K1T34_31885 | H8EXN2 | Positive | 6564839 - 6564994 | 5596.47 |
| a24 family peptidase | K1T34_31890 | Not Available | Positive | 6566119 - 6566937 | 27295.5 |
| chorismate synthase | K1T34_31895 | A4FBE6 | Positive | 6566983 - 6568170 | 41644.7 |
| shikimate kinase | K1T34_31900 | A4FBE7 | Positive | 6568167 - 6568691 | 18019.5 |
| 3-dehydroquinate synthase | K1T34_31905 | A4FBE8 | Positive | 6568749 - 6569858 | 38910.0 |
| type ii 3-dehydroquinate dehydratase | K1T34_31910 | A4FBE9 | Positive | 6569855 - 6570286 | 15326.2 |
| dna glycosylase | K1T34_31915 | P54557 | Positive | 6570295 - 6571206 | 33090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
