Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| llm class f420-dependent oxidoreductase | K1T34_30520 | P9WKN4 | Positive | 6285231 - 6286061 | 30336.8 |
| llm class f420-dependent oxidoreductase | K1T34_30525 | P9WKN4 | Positive | 6286081 - 6286920 | 30289.8 |
| llm class f420-dependent oxidoreductase | K1T34_30530 | P9WKN4 | Positive | 6286917 - 6287747 | 30303.1 |
| tigr03557 family f420-dependent llm class oxidoreductase | K1T34_30535 | E8NCH3 | Positive | 6287763 - 6288752 | 36155.0 |
| cholesterol catabolism transcriptional regulator kstr | K1T34_30540 | A0R528 | Negative | 6288789 - 6289418 | 22999.9 |
| acyl-coa dehydrogenase | K1T34_30545 | P96855 | Positive | 6289564 - 6291630 | 70914.8 |
| dead/deah box helicase | K1T34_30550 | P94593 | Positive | 6291657 - 6294407 | 98801.8 |
| swim zinc finger family protein | K1T34_30555 | O53500 | Positive | 6294407 - 6295567 | 42069.9 |
| transcriptional regulator | K1T34_30560 | Not Available | Negative | 6295552 - 6296238 | 24257.3 |
| gtp cyclohydrolase i fole | K1T34_30565 | O66603 | Positive | 6296396 - 6296995 | 21507.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
