Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf349 domain-containing protein | K1T34_29920 | A0QVX6 | Negative | 6160270 - 6161583 | 48608.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | K1T34_29925 | A4FAJ5 | Positive | 6161832 - 6162722 | 31911.1 |
| diaminopimelate epimerase | K1T34_29930 | Q0S1N7 | Positive | 6162733 - 6163560 | 28507.6 |
| valine--trna ligase | K1T34_29935 | Q47NK0 | Negative | 6163583 - 6166114 | 93349.1 |
| mfs transporter | K1T34_29940 | O32859 | Negative | 6166125 - 6167378 | 43550.4 |
| winged helix-turn-helix domain-containing protein | K1T34_29945 | Not Available | Positive | 6167442 - 6167945 | 18442.9 |
| gtpase hflx | K1T34_29950 | D9R4W7 | Positive | 6167988 - 6169421 | 51740.6 |
| esterase-like activity of phytase family protein | K1T34_29955 | Not Available | Positive | 6169475 - 6170500 | 35247.1 |
| transcriptional repressor lexa | K1T34_29960 | A1T7V4 | Negative | 6170790 - 6171506 | 25596.7 |
| lysm peptidoglycan-binding domain-containing protein | K1T34_29965 | I6YA32 | Positive | 6171838 - 6172341 | 17208.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
