Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | K1T34_27720 | Q9KEE9 | Positive | 5706234 - 5707040 | 29179.3 |
| glycoside hydrolase family 27 protein | K1T34_27725 | Q42656 | Positive | 5707133 - 5708293 | 40936.6 |
| coa transferase subunit a | K1T34_27730 | Q8VPF3 | Positive | 5708503 - 5709312 | 28922.4 |
| coa-transferase subunit beta | K1T34_27735 | Q8VPF2 | Positive | 5709309 - 5710064 | 26428.7 |
| thiolase family protein | K1T34_27740 | Q9I6R0 | Positive | 5710061 - 5711242 | 41161.0 |
| protocatechuate 3,4-dioxygenase subunit beta | K1T34_27745 | P15110 | Positive | 5711295 - 5712029 | 27596.2 |
| protocatechuate 3,4-dioxygenase subunit alpha | K1T34_27750 | P20371 | Positive | 5712029 - 5712580 | 19969.4 |
| 3-oxoadipate enol-lactonase | K1T34_27755 | P00632 | Positive | 5712612 - 5713391 | 27476.8 |
| 4-carboxymuconolactone decarboxylase | K1T34_27760 | P20370 | Positive | 5713391 - 5713804 | 14849.7 |
| helix-turn-helix domain-containing protein | K1T34_27765 | Q52154 | Positive | 5713815 - 5714621 | 28744.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
