Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmn reductase | K1T34_25020 | O31038 | Positive | 5130537 - 5131145 | 21180.2 |
| rna polymerase sigma factor | K1T34_25025 | Q52997 | Negative | 5131193 - 5132452 | 45385.2 |
| ycii family protein | K1T34_25030 | Q52996 | Negative | 5132449 - 5132805 | 13067.6 |
| metalloregulator arsr/smtb family transcription factor | K1T34_25035 | O53478 | Positive | 5132971 - 5133309 | 12494.0 |
| srpbcc domain-containing protein | K1T34_25040 | Not Available | Positive | 5133306 - 5133719 | 14948.2 |
| dna glycosylase | K1T34_25045 | Not Available | Positive | 5133858 - 5134250 | 13601.2 |
| tetr family transcriptional regulator | K1T34_25050 | Q7TVI1 | Positive | 5134795 - 5135466 | 24357.2 |
| epimerase | K1T34_25055 | A2QWW3 | Negative | 5135414 - 5136094 | 24738.6 |
| carboxymuconolactone decarboxylase family protein | K1T34_25060 | P29911 | Negative | 5136103 - 5136501 | 13959.0 |
| glycoside hydrolase family 2 | K1T34_25065 | T2KPJ7 | Negative | 5136525 - 5138276 | 64631.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
