Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K1T34_22670 | Not Available | Negative | 4648940 - 4649347 | 13838.5 |
| nadp-dependent isocitrate dehydrogenase | K1T34_22675 | P65098 | Positive | 4649650 - 4650873 | 45375.0 |
| sh3 domain-containing protein | K1T34_22680 | Not Available | Positive | 4651125 - 4651424 | 10504.8 |
| permease | K1T34_22685 | Not Available | Negative | 4651455 - 4652012 | 19453.1 |
| whg domain-containing protein | K1T34_22690 | O53789 | Negative | 4652134 - 4652703 | 19813.5 |
| mbl fold metallo-hydrolase | K1T34_22695 | P50474 | Negative | 4652746 - 4653486 | 26698.6 |
| exodeoxyribonuclease iii | K1T34_22700 | O26314 | Positive | 4653528 - 4654343 | 29955.0 |
| chitinase | K1T34_22705 | Q5NTA4 | Negative | 4654476 - 4655195 | 25097.3 |
| hypothetical protein | K1T34_22710 | Not Available | Positive | 4655657 - 4655989 | 11276.0 |
| tryptophan--trna ligase | K1T34_22715 | Q82HU1 | Positive | 4656106 - 4657128 | 37547.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
