Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | K1T34_22020 | A6W5W3 | Positive | 4512152 - 4512532 | 14452.7 |
| hypothetical protein | K1T34_22025 | Not Available | Positive | 4512529 - 4512714 | 6485.9 |
| 30s ribosomal protein s11 | K1T34_22030 | A4FPJ4 | Positive | 4512733 - 4513140 | 14355.3 |
| 30s ribosomal protein s4 | K1T34_22035 | A4FPJ3 | Positive | 4513164 - 4513769 | 23276.3 |
| dna-directed rna polymerase subunit alpha | K1T34_22040 | A4FPJ2 | Positive | 4513877 - 4514950 | 38212.3 |
| 50s ribosomal protein l17 | K1T34_22045 | A4FPJ1 | Positive | 4514994 - 4515563 | 20432.9 |
| trna pseudouridine(38-40) synthase trua | K1T34_22050 | P65847 | Positive | 4515568 - 4516473 | 32663.6 |
| class i sam-dependent methyltransferase | K1T34_22055 | C5C0T0 | Positive | 4516485 - 4517114 | 22573.8 |
| alpha/beta fold hydrolase | K1T34_22060 | O80476 | Positive | 4517227 - 4517901 | 24245.6 |
| hypothetical protein | K1T34_22065 | Not Available | Negative | 4517960 - 4518679 | 25727.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
