Amycolatopsis sp. Q1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. Q1 is a microbial species characterized by the presence of flagella, indicating its motility. This trait can be significant for its ecological interactions, as motility may enhance its ability to access nutrients or evade unfavorable conditions in its environment. The genome of Amycolatopsis sp. Q1 is composed of two replicons, which is notable as it may reflect a certain level of complexity in its genetic organization. The presence of multiple replicons can be associated with adaptability and versatility in various ecological niches. The genomic information for Amycolatopsis sp. Q1 is cataloged under the accessions CP080519.1 and CP080520.1. These accessions provide a basis for further exploration of the species' genetic makeup, potential metabolic pathways, and roles in its natural habitat. In summary, the combination of motility through flagella and the complexity associated with having two replicons suggests that Amycolatopsis sp. Q1 may possess unique adaptations that confer ecological advantages. These traits could enable it to thrive in diverse environments, interact with other microorganisms, and contribute to nutrient cycling processes. Understanding these characteristics can provide insights into the ecological roles of Amycolatopsis sp. Q1 within its specific habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. DSM 110486
StrainQ1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. Q1, Chromosome

Gene Summary

Adenine Count

1633571 bp

Thymine Count

1626861 bp

Guanine Count

3838957 bp

Cytosine Count

3857741 bp

Genome Length

10957230 bp

Protein-coding Genes

10464 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypc/hybg/hupf family hydrogenase formation chaperoneK1T34_19820P40428Negative4087848 - 40881209736.69
hydrogenase maturation proteaseK1T34_19825P27649Negative4088233 - 408873317388.0
hypothetical proteinK1T34_19830Not AvailableNegative4088730 - 409005248238.9
hypothetical proteinK1T34_19835Not AvailableNegative4090049 - 409068723893.8
hypothetical proteinK1T34_19840Not AvailableNegative4090680 - 409129722573.9
nifu family proteinK1T34_19845Q93W20Negative4091294 - 409186019916.7
nickel-dependent hydrogenase large subunitK1T34_19850P15284Negative4091864 - 409366067611.4
hydrogenase expression protein hypeK1T34_19855P13063Negative4093674 - 409472337988.4
sis domain-containing proteinK1T34_19860B8J0B1Negative4094720 - 409541224208.4
hypc/hybg/hupf family hydrogenase formation chaperoneK1T34_19865Not AvailableNegative4095432 - 40956206478.85

Displaying genes 3981 – 3990 of 10591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.