Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypc/hybg/hupf family hydrogenase formation chaperone | K1T34_19820 | P40428 | Negative | 4087848 - 4088120 | 9736.69 |
| hydrogenase maturation protease | K1T34_19825 | P27649 | Negative | 4088233 - 4088733 | 17388.0 |
| hypothetical protein | K1T34_19830 | Not Available | Negative | 4088730 - 4090052 | 48238.9 |
| hypothetical protein | K1T34_19835 | Not Available | Negative | 4090049 - 4090687 | 23893.8 |
| hypothetical protein | K1T34_19840 | Not Available | Negative | 4090680 - 4091297 | 22573.9 |
| nifu family protein | K1T34_19845 | Q93W20 | Negative | 4091294 - 4091860 | 19916.7 |
| nickel-dependent hydrogenase large subunit | K1T34_19850 | P15284 | Negative | 4091864 - 4093660 | 67611.4 |
| hydrogenase expression protein hype | K1T34_19855 | P13063 | Negative | 4093674 - 4094723 | 37988.4 |
| sis domain-containing protein | K1T34_19860 | B8J0B1 | Negative | 4094720 - 4095412 | 24208.4 |
| hypc/hybg/hupf family hydrogenase formation chaperone | K1T34_19865 | Not Available | Negative | 4095432 - 4095620 | 6478.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
