Amycolatopsis sp. Q1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. Q1 is a microbial species characterized by the presence of flagella, indicating its motility. This trait can be significant for its ecological interactions, as motility may enhance its ability to access nutrients or evade unfavorable conditions in its environment. The genome of Amycolatopsis sp. Q1 is composed of two replicons, which is notable as it may reflect a certain level of complexity in its genetic organization. The presence of multiple replicons can be associated with adaptability and versatility in various ecological niches. The genomic information for Amycolatopsis sp. Q1 is cataloged under the accessions CP080519.1 and CP080520.1. These accessions provide a basis for further exploration of the species' genetic makeup, potential metabolic pathways, and roles in its natural habitat. In summary, the combination of motility through flagella and the complexity associated with having two replicons suggests that Amycolatopsis sp. Q1 may possess unique adaptations that confer ecological advantages. These traits could enable it to thrive in diverse environments, interact with other microorganisms, and contribute to nutrient cycling processes. Understanding these characteristics can provide insights into the ecological roles of Amycolatopsis sp. Q1 within its specific habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. DSM 110486
StrainQ1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. Q1, Chromosome

Gene Summary

Adenine Count

1633571 bp

Thymine Count

1626861 bp

Guanine Count

3838957 bp

Cytosine Count

3857741 bp

Genome Length

10957230 bp

Protein-coding Genes

10464 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinK1T34_19770Not AvailableNegative4078485 - 407916523436.8
sigma-70 family rna polymerase sigma factorK1T34_19775H8EXN1Negative4079129 - 407966519297.2
trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmoK1T34_19780O27825Negative4079741 - 408014814598.4
carbon-nitrogen hydrolase family proteinK1T34_19785Q500U1Negative4080300 - 408130736279.1
helix-turn-helix domain-containing proteinK1T34_19790B1Q2A8Positive4081464 - 408239333599.1
carbamoyltransferase hypfK1T34_19795O07451Positive4082398 - 408465080476.6
hydrogenase nickel incorporation protein hypbK1T34_19800Q43949Negative4084580 - 408530825741.7
hydrogenase maturation nickel metallochaperone hypaK1T34_19805O30461Negative4085310 - 408563911576.0
hydrogenase expression/formation protein hypeK1T34_19810P31905Negative4085639 - 408671537111.7
hydrogenase formation protein hypdK1T34_19815P31904Negative4086712 - 408783941488.2

Displaying genes 3971 – 3980 of 10591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.