Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K1T34_19770 | Not Available | Negative | 4078485 - 4079165 | 23436.8 |
| sigma-70 family rna polymerase sigma factor | K1T34_19775 | H8EXN1 | Negative | 4079129 - 4079665 | 19297.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | K1T34_19780 | O27825 | Negative | 4079741 - 4080148 | 14598.4 |
| carbon-nitrogen hydrolase family protein | K1T34_19785 | Q500U1 | Negative | 4080300 - 4081307 | 36279.1 |
| helix-turn-helix domain-containing protein | K1T34_19790 | B1Q2A8 | Positive | 4081464 - 4082393 | 33599.1 |
| carbamoyltransferase hypf | K1T34_19795 | O07451 | Positive | 4082398 - 4084650 | 80476.6 |
| hydrogenase nickel incorporation protein hypb | K1T34_19800 | Q43949 | Negative | 4084580 - 4085308 | 25741.7 |
| hydrogenase maturation nickel metallochaperone hypa | K1T34_19805 | O30461 | Negative | 4085310 - 4085639 | 11576.0 |
| hydrogenase expression/formation protein hype | K1T34_19810 | P31905 | Negative | 4085639 - 4086715 | 37111.7 |
| hydrogenase formation protein hypd | K1T34_19815 | P31904 | Negative | 4086712 - 4087839 | 41488.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
