Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo acid dehydrogenase subunit e2 | K1T34_16770 | Q6ABX9 | Negative | 3463261 - 3464604 | 46489.1 |
| alpha-ketoacid dehydrogenase subunit beta | K1T34_16775 | Q6ABX8 | Negative | 3464621 - 3465613 | 35798.9 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | K1T34_16780 | P9WIS2 | Negative | 3465613 - 3466818 | 44634.0 |
| m20/m25/m40 family metallo-hydrolase | K1T34_16785 | B2KZE7 | Positive | 3467171 - 3468601 | 50431.8 |
| abc transporter substrate-binding protein | K1T34_16790 | P0AEQ5 | Positive | 3468855 - 3469778 | 31462.2 |
| amino acid abc transporter permease | K1T34_16795 | P0AFT3 | Positive | 3469803 - 3470756 | 34943.5 |
| amino acid abc transporter atp-binding protein | K1T34_16800 | P39456 | Positive | 3470753 - 3471526 | 28380.8 |
| esx secretion-associated protein espg | K1T34_16805 | Not Available | Negative | 3471597 - 3472343 | 27516.0 |
| hypothetical protein | K1T34_16810 | Not Available | Negative | 3472628 - 3473878 | 40484.9 |
| duf3558 domain-containing protein | K1T34_16815 | Not Available | Negative | 3473882 - 3474502 | 20860.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
