Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | K1T34_16420 | Q5HGK2 | Positive | 3392218 - 3392910 | 23758.0 |
| duf4380 domain-containing protein | K1T34_16425 | Not Available | Negative | 3392915 - 3393805 | 30705.4 |
| galactonate dehydratase | K1T34_16430 | Q8XVS8 | Negative | 3393799 - 3394947 | 41135.1 |
| sdr family oxidoreductase | K1T34_16435 | P19992 | Negative | 3394976 - 3395680 | 24312.7 |
| glycoside hydrolase family 27 protein | K1T34_16440 | Q8RX86 | Negative | 3395714 - 3397771 | 72550.5 |
| sugar kinase | K1T34_16445 | Q53W83 | Positive | 3397960 - 3398904 | 32527.7 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | K1T34_16450 | Q6BF16 | Positive | 3398901 - 3399515 | 20671.8 |
| lactonase family protein | K1T34_16455 | O34499 | Positive | 3399512 - 3400516 | 34333.5 |
| alpha-galactosidase | K1T34_16460 | Q0CVH2 | Negative | 3400574 - 3402628 | 74619.8 |
| carbohydrate abc transporter permease | K1T34_16465 | O58760 | Negative | 3402625 - 3403512 | 31623.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
