Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis sp. DSM 110486 |
| Strain | Q1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1633571 bp
Thymine Count
1626861 bp
Guanine Count
3838957 bp
Cytosine Count
3857741 bp
Genome Length
10957230 bp
Protein-coding Genes
10464 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | K1T34_15920 | Not Available | Negative | 3288886 - 3291864 | 103301.0 |
| type vii secretion protein eccb | K1T34_15925 | Not Available | Negative | 3291941 - 3292210 | 9177.19 |
| type vii secretion integral membrane protein eccd | K1T34_15930 | P9WNP8 | Negative | 3292226 - 3293611 | 48393.0 |
| type vii secretion protein eccca | K1T34_15935 | D1A4G7 | Negative | 3293667 - 3297668 | 145545.0 |
| hypothetical protein | K1T34_15940 | Not Available | Negative | 3297697 - 3301284 | 116418.0 |
| esx-1 secretion-associated protein | K1T34_15945 | Not Available | Negative | 3301333 - 3301863 | 18383.2 |
| wxg100 family type vii secretion target | K1T34_15950 | Not Available | Negative | 3302001 - 3302300 | 10996.6 |
| wxg100 family type vii secretion target | K1T34_15955 | P0A567 | Negative | 3302344 - 3302682 | 11615.3 |
| alpha/beta hydrolase | K1T34_15960 | O31581 | Positive | 3303063 - 3303896 | 30303.6 |
| isopentenyl-diphosphate delta-isomerase | K1T34_15965 | A4FK76 | Positive | 3304397 - 3304981 | 21838.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
