Amycolatopsis sp. Q1

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis sp. Q1 is a microbial species characterized by the presence of flagella, indicating its motility. This trait can be significant for its ecological interactions, as motility may enhance its ability to access nutrients or evade unfavorable conditions in its environment. The genome of Amycolatopsis sp. Q1 is composed of two replicons, which is notable as it may reflect a certain level of complexity in its genetic organization. The presence of multiple replicons can be associated with adaptability and versatility in various ecological niches. The genomic information for Amycolatopsis sp. Q1 is cataloged under the accessions CP080519.1 and CP080520.1. These accessions provide a basis for further exploration of the species' genetic makeup, potential metabolic pathways, and roles in its natural habitat. In summary, the combination of motility through flagella and the complexity associated with having two replicons suggests that Amycolatopsis sp. Q1 may possess unique adaptations that confer ecological advantages. These traits could enable it to thrive in diverse environments, interact with other microorganisms, and contribute to nutrient cycling processes. Understanding these characteristics can provide insights into the ecological roles of Amycolatopsis sp. Q1 within its specific habitat.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis sp. DSM 110486
StrainQ1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis sp. Q1, Chromosome

Gene Summary

Adenine Count

1633571 bp

Thymine Count

1626861 bp

Guanine Count

3838957 bp

Cytosine Count

3857741 bp

Genome Length

10957230 bp

Protein-coding Genes

10464 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidase family proteinK1T34_15720Not AvailableNegative3225093 - 322549414442.9
duf2339 domain-containing proteinK1T34_15725Not AvailableNegative3225555 - 322770872676.1
hypothetical proteinK1T34_15730Not AvailablePositive3227831 - 322812411088.1
gfo/idh/moca family oxidoreductaseK1T34_15735Q6DF30Negative3228368 - 322930032563.8
isochorismatase family proteinK1T34_15740C5NU54Positive3229393 - 322994720286.6
3,4-dihydroxy-2-butanone-4-phosphate synthaseK1T34_15745Q5A3V6Negative3229959 - 323047717603.2
alpha/beta hydrolaseK1T34_15750B0SW62Negative3230477 - 323126827245.5
gaf domain-containing proteinK1T34_15755Q8NML3Positive3231451 - 323377582535.9
gaf domain-containing proteinK1T34_15760Not AvailablePositive3233772 - 323567668045.0
amp-binding proteinK1T34_15765F4HUK6Negative3235618 - 323715654794.7

Displaying genes 3161 – 3170 of 10591 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.