Gimesia chilikensis AV41, V6

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Gimesia

Description

Gimesia chilikensis AV41, V6 is characterized by a single replicon, indicating a streamlined genetic structure. The accession number for this strain is CP036347.1, which provides a reference for further genetic and genomic studies. The single replicon structure may suggest a simplified genomic organization, which can be beneficial for adaptability and efficiency in various environments. This trait is often associated with microorganisms that thrive in specific ecological niches, potentially allowing Gimesia chilikensis to respond effectively to particular environmental pressures. In the context of its ecological role, the genetic traits of Gimesia chilikensis AV41, V6 may influence its interactions with other microorganisms and its environment. Further research into its biological functions and ecological interactions could provide insights into its role in microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusGimesia
SpeciesGimesia chilikensis
StrainAV41, V6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gimesia chilikensis AV41, V6, Chromosome

Gene Summary

Adenine Count

1890093 bp

Thymine Count

1913707 bp

Guanine Count

2175715 bp

Cytosine Count

2098288 bp

Genome Length

8097090 bp

Protein-coding Genes

6324 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii secretion system protein fV6x_53360Q1D0A0Negative6822919 - 682412744393.5
type ii secretion system protein eV6x_53370Q1D098Negative6824190 - 682587262373.3
bacterial type ii/iii secretion system short domain proteinV6x_53380P35818Negative6825925 - 6829689136729.0
ef handV6x_53390Not AvailablePositive6830021 - 683113640997.2
hypothetical proteinV6x_53400Not AvailableNegative6831173 - 683305070964.5
spermidine synthaseV6x_53410Not AvailableNegative6833313 - 6836666125322.0
aminopeptidase sV6x_53420P25152Positive6836986 - 683857559101.1
hypothetical proteinV6x_53430Not AvailableNegative6838560 - 683906618436.2
neutral/alkaline non-lysosomal ceramidaseV6x_53440Q5W7F1Negative6839158 - 684059752813.2
modification methylase mboiiV6x_53450P29538Negative6840760 - 684171336714.7

Displaying genes 5321 – 5330 of 6394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.