Gimesia chilikensis AV41, V6

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Gimesia

Description

Gimesia chilikensis AV41, V6 is characterized by a single replicon, indicating a streamlined genetic structure. The accession number for this strain is CP036347.1, which provides a reference for further genetic and genomic studies. The single replicon structure may suggest a simplified genomic organization, which can be beneficial for adaptability and efficiency in various environments. This trait is often associated with microorganisms that thrive in specific ecological niches, potentially allowing Gimesia chilikensis to respond effectively to particular environmental pressures. In the context of its ecological role, the genetic traits of Gimesia chilikensis AV41, V6 may influence its interactions with other microorganisms and its environment. Further research into its biological functions and ecological interactions could provide insights into its role in microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusGimesia
SpeciesGimesia chilikensis
StrainAV41, V6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gimesia chilikensis AV41, V6, Chromosome

Gene Summary

Adenine Count

1890093 bp

Thymine Count

1913707 bp

Guanine Count

2175715 bp

Cytosine Count

2098288 bp

Genome Length

8097090 bp

Protein-coding Genes

6324 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
autoinducer 2 sensor kinase/phosphatase luxqV6x_37220Q7MD16Positive4835492 - 483713861521.8
taurine catabolism dioxygenase taud, tfda familyV6x_37230A0A084AFG6Positive4837243 - 483828939280.5
inner membrane protein ybanV6x_37240P0AAR6Positive4838393 - 483889918296.1
hydroxypyruvate isomeraseV6x_37250P30147Positive4839073 - 483999634121.8
hypothetical proteinV6x_37260Not AvailablePositive4840102 - 484047613792.4
quinoprotein glucose dehydrogenase b precursorV6x_37270Q6UWX4Negative4840595 - 484180044463.0
npcbm/new2 domain proteinV6x_37280A9WNA0Negative4841936 - 484313844725.7
prenyltransferase and squalene oxidase repeat proteinV6x_37290Not AvailableNegative4843172 - 484427840910.1
hypothetical proteinV6x_37300Not AvailableNegative4844382 - 484474113429.3
phosphoribosylformylglycinamidine synthaseV6x_37310Q3Z9H5Positive4845069 - 484588429213.8

Displaying genes 3711 – 3720 of 6394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.