Gimesia chilikensis AV41, V6

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Gimesia

Description

Gimesia chilikensis AV41, V6 is characterized by a single replicon, indicating a streamlined genetic structure. The accession number for this strain is CP036347.1, which provides a reference for further genetic and genomic studies. The single replicon structure may suggest a simplified genomic organization, which can be beneficial for adaptability and efficiency in various environments. This trait is often associated with microorganisms that thrive in specific ecological niches, potentially allowing Gimesia chilikensis to respond effectively to particular environmental pressures. In the context of its ecological role, the genetic traits of Gimesia chilikensis AV41, V6 may influence its interactions with other microorganisms and its environment. Further research into its biological functions and ecological interactions could provide insights into its role in microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusGimesia
SpeciesGimesia chilikensis
StrainAV41, V6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gimesia chilikensis AV41, V6, Chromosome

Gene Summary

Adenine Count

1890093 bp

Thymine Count

1913707 bp

Guanine Count

2175715 bp

Cytosine Count

2098288 bp

Genome Length

8097090 bp

Protein-coding Genes

6324 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinV6x_00820Not AvailableNegative87255 - 8785423250.7
hypothetical proteinV6x_00830O28229Negative87956 - 8839016554.6
hypothetical proteinV6x_00840Not AvailablePositive88518 - 9006856420.2
phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitiveV6x_00850P00888Negative90087 - 9113038030.5
shikimate kinaseV6x_00860Q67N09Negative91189 - 9171018541.1
ecf rna polymerase sigma factor siglV6x_00870H8EXN1Positive92176 - 9267319182.2
hypothetical proteinV6x_00880Not AvailablePositive92666 - 9311216583.6
type ii secretion system protein eV6x_00890P37093Positive93112 - 9432944619.6
type ii secretion system protein fV6x_00900P45780Positive94397 - 9548541063.2
type ii secretion system protein fV6x_00910Q9X4G9Positive95570 - 9680846051.2

Displaying genes 91 – 100 of 6394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.