Chitinophaga alhagiae T22

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga alhagiae T22 is a Gram-negative bacterium characterized by its rod-shaped morphology. This species is notable for having a single replicon, which is a feature that can influence its genetic stability and replication. The genomic sequence of Chitinophaga alhagiae T22 is cataloged under the accession number CP029600.1, providing a reference for further studies and comparisons within the genus Chitinophaga. Chitinophaga species are generally known for their role in the degradation of chitin, a major component of the exoskeletons of arthropods and fungal cell walls. This ecological function positions them as important players in nutrient cycling and the decomposition of organic matter in various environments. The specific traits of Chitinophaga alhagiae T22 suggest that it could also contribute to similar ecological processes, although detailed functional studies would be necessary to confirm its specific roles in chitin degradation and its interactions with other organisms in its habitat. Understanding the characteristics and ecological roles of Chitinophaga alhagiae T22 expands our knowledge of microbial diversity and functionality, particularly in relation to chitin degradation and its implications for ecosystem health and nutrient recycling.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga alhagiae
StrainT22

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga alhagiae T22, Chromosome

Gene Summary

Adenine Count

627787 bp

Thymine Count

626369 bp

Guanine Count

699343 bp

Cytosine Count

710584 bp

Genome Length

2664183 bp

Protein-coding Genes

2140 genes

Non-Coding Genes

19 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s16DLD77_10105A6LCP4Positive2481765 - 248223517544.2
16s rrna processing protein rimmDLD77_10110A0M5T0Positive2482309 - 248283019529.7
trna (guanosine(37)-n1)-methyltransferase trmdDLD77_10115A5FHV7Positive2482843 - 248352325709.0
50s ribosomal protein l19DLD77_10120B2RGQ9Positive2483611 - 248395813038.9
hypothetical proteinDLD77_10125Not AvailablePositive2484265 - 248460612244.3
twin-arginine translocase tata/tate family subunitDLD77_10130B3EMS7Positive2484702 - 24849268406.68
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit aDLD77_10135B3EM22Positive2485013 - 248645852833.6
hypothetical proteinDLD77_10140P0AEZ8Positive2486475 - 248770145723.1
doxx-like family proteinDLD77_10145Not AvailableNegative2487882 - 248830415497.2
rna-binding proteinDLD77_10150P44754Positive2488431 - 248881714763.7

Displaying genes 2021 – 2030 of 2159 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.