Polynucleobacter ibericus es-MAR-2

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Polynucleobacter

Description

Polynucleobacter ibericus es-MAR-2 is a rod-shaped bacterium characterized by having a single replicon. This trait is indicative of its genomic organization, which can influence its replication and cellular processes. The organism is cataloged in the National Center for Biotechnology Information (NCBI) with the accession number CP061309.1, which provides a reference for its genetic information and aids in further research and classification within the microbial taxonomy. The rod shape of Polynucleobacter ibericus es-MAR-2 may contribute to its ecological niche and functional capabilities in diverse environments, particularly in aquatic ecosystems where such morphologies are common. This bacterium is part of a group that is often involved in important biogeochemical processes, such as the cycling of nutrients and organic matter in freshwater habitats. By understanding the traits of Polynucleobacter ibericus es-MAR-2, researchers can gain insights into its role in microbial communities and its interactions with other organisms in its environment. Overall, the study of Polynucleobacter ibericus es-MAR-2 not only sheds light on its specific characteristics but also emphasizes the importance of rod-shaped bacteria in maintaining ecosystem health and stability through their contributions to fundamental ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPolynucleobacter
SpeciesPolynucleobacter ibericus
Straines-MAR-2

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polynucleobacter ibericus es-MAR-2, Chromosome

Gene Summary

Adenine Count

521629 bp

Thymine Count

517634 bp

Guanine Count

433771 bp

Cytosine Count

431007 bp

Genome Length

1904269 bp

Protein-coding Genes

1896 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad-dependent monooxygenaseAOC20_08655P25534Positive1710184 - 171133542493.8
trna dihydrouridine synthase dusbAOC20_08660Q9HUW1Positive1711465 - 171248137182.0
fis family transcriptional regulatorAOC20_08665Q8Y231Positive1712540 - 17127798997.11
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseAOC20_08670B1XS23Positive1712826 - 171440656447.6
crossover junction endodeoxyribonuclease ruvcAOC20_08675A4T026Positive1714413 - 171494318537.7
holliday junction branch migration protein ruvaAOC20_08680A4T027Positive1714973 - 171555420766.4
holliday junction branch migration dna helicase ruvbAOC20_08685Q0KEC4Positive1715604 - 171667438958.7
tyrosine--trna ligaseAOC20_08690Q475S5Negative1716671 - 171790345246.6
anhydro-n-acetylmuramic acid kinaseAOC20_08695Q8Y241Positive1717980 - 171910740343.2
iron-sulfur cluster insertion protein erpaAOC20_08700A4T031Negative1719135 - 171950913271.4

Displaying genes 1731 – 1740 of 1940 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.