Polynucleobacter arcticus UK-Long2-W17

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Polynucleobacter

Description

Polynucleobacter arcticus UK-Long2-W17 is a rod-shaped bacterium characterized by a single replicon. This trait is significant as it suggests a streamlined genomic organization, which may facilitate efficient replication and cellular processes. The organism is cataloged under the accession number CP028940.1, indicating its genetic sequence is available for further study. Polynucleobacter species are typically found in freshwater environments, and their presence can be indicative of specific ecological conditions. The rod shape of P. arcticus may confer advantages in various aquatic habitats, such as enhanced motility or adaptability to different nutrient conditions. Understanding the genetic and morphological traits of P. arcticus can provide insights into its ecological role within freshwater ecosystems, particularly in relation to nutrient cycling and interactions with other microbial communities. In summary, Polynucleobacter arcticus UK-Long2-W17 presents a distinct morphological characteristic and a simple genomic structure, which may influence its ecological interactions and functional roles in freshwater environments. Further investigation into its ecological contributions could enhance our understanding of microbial dynamics in these habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusPolynucleobacter
SpeciesPolynucleobacter arcticus
StrainUK-Long2-W17

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Polynucleobacter arcticus UK-Long2-W17, Chromosome

Gene Summary

Adenine Count

568717 bp

Thymine Count

560995 bp

Guanine Count

471039 bp

Cytosine Count

488702 bp

Genome Length

2090447 bp

Protein-coding Genes

2076 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate dehydrogenaseDN92_01105B7VMW2Positive204271 - 20512530232.2
monofunctional biosynthetic peptidoglycan transglycosylaseDN92_01110Q1LIV1Positive205142 - 20588528128.1
orotidine-5'-phosphate decarboxylaseDN92_01115A4G2V0Negative205904 - 20674930419.1
magnesium and cobalt transport protein coraDN92_01120P0ABI6Positive206823 - 20779437492.8
damage-inducible protein cinaDN92_01125P51967Negative207808 - 20832017887.1
phosphatidylglycerophosphatase aDN92_01130P44157Negative208317 - 20889220891.8
thiamine-phosphate kinaseDN92_01135P55881Negative208889 - 20991136693.1
nadp-dependent malic enzymeDN92_01140Q9ZFV8Positive209996 - 21232383303.3
hypothetical proteinDN92_01145Not AvailablePositive212462 - 21308222837.7
16s rrna (uracil(1498)-n(3))-methyltransferaseDN92_01150P37995Negative213111 - 21387227959.6

Displaying genes 221 – 230 of 2120 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.