Yersinia kristensenii subsp. rochesterensis EPLC-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia kristensenii subsp. rochesterensis EPLC-04 is characterized as a rod-shaped bacterium. It possesses flagella, which contributes to its motility. This subspecies has a notable genomic structure, containing three replicons, indicative of its genetic complexity and potential for adaptability in various environments. The available genomic data for Yersinia kristensenii subsp. rochesterensis EPLC-04 can be referenced through several accessions, specifically CP032482.1, CP032483.1, and CP032484.1. These accessions provide insights into its genetic makeup and can be used for further research into its characteristics and behaviors. Understanding the genetic and morphological traits of Yersinia kristensenii subsp. rochesterensis EPLC-04 may offer insights into its ecological roles, particularly in relation to its motility and adaptability. The presence of flagella suggests that this organism may be capable of navigating its environment effectively, which could influence its interactions with other microorganisms and its ecological niche. Further investigation into its behavior and ecological interactions could enhance our understanding of its role within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia rochesterensis
StrainEPLC-04

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia kristensenii subsp. rochesterensis EPLC-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia kristensenii subsp. rochesterensis EPLC-04, Chromosome

Gene Summary

Adenine Count

1164645 bp

Thymine Count

1165995 bp

Guanine Count

1053455 bp

Cytosine Count

1053858 bp

Genome Length

4438053 bp

Protein-coding Genes

3893 genes

Non-Coding Genes

222 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plp-dependent aminotransferase family proteinDXZ79_01700P39389Positive351448 - 35289953642.2
heme abc transporter atp-binding proteinDXZ79_01705P74981Negative352908 - 35370829546.7
iron abc transporter permeaseDXZ79_01710Q56992Negative353701 - 35470535629.3
hemin abc transporter substrate-binding proteinDXZ79_01715Q56991Negative354702 - 35554129389.2
hemin-degrading factorDXZ79_01720P31517Negative355538 - 35657539458.5
tonb-dependent hemoglobin/transferrin/lactoferrin family receptorDXZ79_01725P31499Negative356687 - 35871774258.0
hemin uptake protein hempDXZ79_01730P31516Negative358869 - 3591149145.95
hypothetical proteinDXZ79_01735Not AvailablePositive359466 - 3595493180.94
xre family transcriptional regulatorDXZ79_01740P9WJA6Negative360107 - 3603468944.83
type ii toxin-antitoxin system rele/pare family toxinDXZ79_01745Not AvailableNegative360381 - 36070412311.3

Displaying genes 471 – 480 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.