Yersinia kristensenii subsp. rochesterensis EPLC-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia kristensenii subsp. rochesterensis EPLC-04 is characterized as a rod-shaped bacterium. It possesses flagella, which contributes to its motility. This subspecies has a notable genomic structure, containing three replicons, indicative of its genetic complexity and potential for adaptability in various environments. The available genomic data for Yersinia kristensenii subsp. rochesterensis EPLC-04 can be referenced through several accessions, specifically CP032482.1, CP032483.1, and CP032484.1. These accessions provide insights into its genetic makeup and can be used for further research into its characteristics and behaviors. Understanding the genetic and morphological traits of Yersinia kristensenii subsp. rochesterensis EPLC-04 may offer insights into its ecological roles, particularly in relation to its motility and adaptability. The presence of flagella suggests that this organism may be capable of navigating its environment effectively, which could influence its interactions with other microorganisms and its ecological niche. Further investigation into its behavior and ecological interactions could enhance our understanding of its role within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia rochesterensis
StrainEPLC-04

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia kristensenii subsp. rochesterensis EPLC-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia kristensenii subsp. rochesterensis EPLC-04, Chromosome

Gene Summary

Adenine Count

1164645 bp

Thymine Count

1165995 bp

Guanine Count

1053455 bp

Cytosine Count

1053858 bp

Genome Length

4438053 bp

Protein-coding Genes

3893 genes

Non-Coding Genes

222 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
o-antigen ligase family proteinDXZ79_12000Not AvailableNegative2551704 - 255292445189.5
glycosyltransferaseDXZ79_12005Not AvailableNegative2553076 - 255393634234.5
nadp-dependent isocitrate dehydrogenaseDXZ79_12010P08200Negative2554230 - 255548345898.6
23s rrna pseudouridine(2457) synthase rlueDXZ79_12015Q8ZFQ3Positive2555614 - 255624023446.5
nudix hydrolaseDXZ79_12020A7ZKS4Positive2556233 - 255667916944.1
trna 2-thiouridine(34) synthase mnmaDXZ79_12025A1JLK6Positive2556887 - 255800841522.2
lysogenization regulator hfldDXZ79_12030A1JLJ4Positive2558049 - 255867522641.6
adenylosuccinate lyaseDXZ79_12035P0AB90Positive2558701 - 256007151568.6
porin family proteinDXZ79_12040Not AvailablePositive2560234 - 256085722757.6
two-component system response regulator phopDXZ79_12045Q8CXZ9Positive2560929 - 256160025552.9

Displaying genes 2531 – 2540 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.