Yersinia kristensenii subsp. rochesterensis EPLC-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia kristensenii subsp. rochesterensis EPLC-04 is characterized as a rod-shaped bacterium. It possesses flagella, which contributes to its motility. This subspecies has a notable genomic structure, containing three replicons, indicative of its genetic complexity and potential for adaptability in various environments. The available genomic data for Yersinia kristensenii subsp. rochesterensis EPLC-04 can be referenced through several accessions, specifically CP032482.1, CP032483.1, and CP032484.1. These accessions provide insights into its genetic makeup and can be used for further research into its characteristics and behaviors. Understanding the genetic and morphological traits of Yersinia kristensenii subsp. rochesterensis EPLC-04 may offer insights into its ecological roles, particularly in relation to its motility and adaptability. The presence of flagella suggests that this organism may be capable of navigating its environment effectively, which could influence its interactions with other microorganisms and its ecological niche. Further investigation into its behavior and ecological interactions could enhance our understanding of its role within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia rochesterensis
StrainEPLC-04

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia kristensenii subsp. rochesterensis EPLC-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia kristensenii subsp. rochesterensis EPLC-04, Chromosome

Gene Summary

Adenine Count

1164645 bp

Thymine Count

1165995 bp

Guanine Count

1053455 bp

Cytosine Count

1053858 bp

Genome Length

4438053 bp

Protein-coding Genes

3893 genes

Non-Coding Genes

222 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dmt family transporterDXZ79_09700O26929Negative2065274 - 206634438013.5
yeah/yhbh family proteinDXZ79_09705A1JQJ6Negative2066462 - 206773949337.1
prka family serine protein kinaseDXZ79_09710P0ACY5Negative2067851 - 206978574118.1
hypothetical proteinDXZ79_09715Not AvailablePositive2069833 - 20700458409.54
mipa/ompv family proteinDXZ79_09720P0A908Positive2070208 - 207097828905.9
d-hexose-6-phosphate mutarotaseDXZ79_09725Q8ZPV9Negative2071052 - 207193032572.7
glyceraldehyde-3-phosphate dehydrogenaseDXZ79_09730B7LQ20Negative2072170 - 207317435972.0
peptide-methionine (r)-s-oxide reductaseDXZ79_09735A1JQG8Positive2073513 - 207392615526.0
duf1315 family proteinDXZ79_09740P76231Positive2074002 - 207427410393.7
bifunctional nicotinamidase/pyrazinamidaseDXZ79_09745P21369Negative2074360 - 207501023443.8

Displaying genes 2071 – 2080 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.