Yersinia kristensenii subsp. rochesterensis EPLC-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia kristensenii subsp. rochesterensis EPLC-04 is characterized as a rod-shaped bacterium. It possesses flagella, which contributes to its motility. This subspecies has a notable genomic structure, containing three replicons, indicative of its genetic complexity and potential for adaptability in various environments. The available genomic data for Yersinia kristensenii subsp. rochesterensis EPLC-04 can be referenced through several accessions, specifically CP032482.1, CP032483.1, and CP032484.1. These accessions provide insights into its genetic makeup and can be used for further research into its characteristics and behaviors. Understanding the genetic and morphological traits of Yersinia kristensenii subsp. rochesterensis EPLC-04 may offer insights into its ecological roles, particularly in relation to its motility and adaptability. The presence of flagella suggests that this organism may be capable of navigating its environment effectively, which could influence its interactions with other microorganisms and its ecological niche. Further investigation into its behavior and ecological interactions could enhance our understanding of its role within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia rochesterensis
StrainEPLC-04

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia kristensenii subsp. rochesterensis EPLC-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia kristensenii subsp. rochesterensis EPLC-04, Chromosome

Gene Summary

Adenine Count

1164645 bp

Thymine Count

1165995 bp

Guanine Count

1053455 bp

Cytosine Count

1053858 bp

Genome Length

4438053 bp

Protein-coding Genes

3893 genes

Non-Coding Genes

222 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf979 domain-containing proteinDXZ79_06700Not AvailablePositive1432888 - 143390736535.0
pyroglutamyl-peptidase iDXZ79_06705A1JR34Positive1433916 - 143456322867.7
citrate synthaseDXZ79_06710O68883Negative1434694 - 143597447877.5
succinate dehydrogenase cytochrome b556 subunitDXZ79_06715P69055Positive1436621 - 143701014005.7
succinate dehydrogenase membrane anchor subunitDXZ79_06720P0AC45Positive1437004 - 143735112910.4
succinate dehydrogenase flavoprotein subunitDXZ79_06725G4V4G6Positive1437352 - 143911864371.5
succinate dehydrogenase iron-sulfur subunitDXZ79_06730Q8ZQU2Positive1439173 - 143988926728.3
2-oxoglutarate dehydrogenase e1 componentDXZ79_06735P0AFG5Positive1440182 - 1442989105170.0
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseDXZ79_06740P0AFG7Positive1443018 - 144424144411.5
adp-forming succinate--coa ligase subunit betaDXZ79_06745A7FKR4Positive1444355 - 144552141459.1

Displaying genes 1471 – 1480 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.