Yersinia kristensenii subsp. rochesterensis EPLC-04

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Yersiniaceae

Genus

Yersinia

Description

Yersinia kristensenii subsp. rochesterensis EPLC-04 is characterized as a rod-shaped bacterium. It possesses flagella, which contributes to its motility. This subspecies has a notable genomic structure, containing three replicons, indicative of its genetic complexity and potential for adaptability in various environments. The available genomic data for Yersinia kristensenii subsp. rochesterensis EPLC-04 can be referenced through several accessions, specifically CP032482.1, CP032483.1, and CP032484.1. These accessions provide insights into its genetic makeup and can be used for further research into its characteristics and behaviors. Understanding the genetic and morphological traits of Yersinia kristensenii subsp. rochesterensis EPLC-04 may offer insights into its ecological roles, particularly in relation to its motility and adaptability. The presence of flagella suggests that this organism may be capable of navigating its environment effectively, which could influence its interactions with other microorganisms and its ecological niche. Further investigation into its behavior and ecological interactions could enhance our understanding of its role within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyYersiniaceae
GenusYersinia
SpeciesYersinia rochesterensis
StrainEPLC-04

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Yersinia kristensenii subsp. rochesterensis EPLC-04
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Yersinia kristensenii subsp. rochesterensis EPLC-04, Chromosome

Gene Summary

Adenine Count

1164645 bp

Thymine Count

1165995 bp

Guanine Count

1053455 bp

Cytosine Count

1053858 bp

Genome Length

4438053 bp

Protein-coding Genes

3893 genes

Non-Coding Genes

222 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
autotransporter outer membrane beta-barrel domain-containing proteinDXZ79_05400P52143Negative1150127 - 115191762279.3
alpha-2-macroglobulin family proteinDXZ79_05405P76578Positive1155102 - 1160138184298.0
penicillin-binding protein 1cDXZ79_05410P76577Positive1160187 - 116252686431.2
exotoxinDXZ79_05415P02966Positive1162803 - 116527491988.8
nucleoside-diphosphate kinaseDXZ79_05420B2K9Q4Positive1165580 - 116600815545.4
bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmnDXZ79_05425A1JKR9Positive1166248 - 116744444144.3
type iv pilus biogenesis/stability protein pilwDXZ79_05430P43988Positive1167644 - 116839627607.7
cytoskeleton protein rodzDXZ79_05435A1JKS1Positive1168386 - 116940236027.6
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDXZ79_05440A7FFY9Positive1169538 - 117066240782.3
histidine--trna ligaseDXZ79_05445A1JKS3Positive1171004 - 117227847475.9

Displaying genes 1211 – 1220 of 4127 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.