Burkholderia dolosa PC688, R-3073

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia dolosa PC688, designated as R-3073, is a Gram-negative bacterium characterized by its rod shape and aerobic metabolic requirements. This organism is motile, which may facilitate its interactions within diverse environments. Genetically, Burkholderia dolosa PC688 possesses three replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various ecological niches. The presence of multiple replicons can provide advantages such as increased genetic diversity and the capacity to acquire and maintain plasmids, which may harbor beneficial traits for environmental resistance or pathogenicity. The specific accessions associated with Burkholderia dolosa PC688 are CP086006.1, CP086005.1, and CP086004.1, reflecting its sequenced genomic data. Such genomic insights are essential for understanding the organism's biological functions and potential applications in biotechnology or medicine. This bacterium is part of the Burkholderia genus, which is known for its environmental versatility and interactions with plants and other microorganisms. The ecological role of Burkholderia dolosa PC688 may involve its participation in nutrient cycling or its interactions with other species in its habitat, highlighting the importance of studying such organisms in understanding microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia dolosa
StrainPC688, R-3073

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia dolosa PC688, R-3073


Gene Summary

Adenine Count

563872 bp

Thymine Count

566031 bp

Guanine Count

1138075 bp

Cytosine Count

1140912 bp

Genome Length

3408990 bp

Protein-coding Genes

3050 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter substrate-binding proteinLK445_00690P39325Negative187011 - 18797334257.3
dna topoisomerase ibLK445_00695Q7T6X9Positive188334 - 18946142401.6
pyrroloquinoline quinone biosynthesis protein pqqeLK445_00700Q608P0Negative189359 - 19048941929.0
pyrroloquinoline quinone biosynthesis peptide chaperone pqqdLK445_00705C1DEW6Negative190491 - 19077210489.5
pyrroloquinoline-quinone synthase pqqcLK445_00710B7VAB8Negative190769 - 19148827190.3
pyrroloquinoline quinone biosynthesis protein pqqbLK445_00715Q0K2D1Negative191494 - 19241732147.7
pyrroloquinoline quinone precursor peptide pqqaLK445_00720B4EHL5Negative192481 - 1925552926.51
sigma-54-dependent fis family transcriptional regulatorLK445_00725P28614Negative192836 - 19483372305.5
alpha/beta fold hydrolaseLK445_00730Q9PD69Positive195170 - 19615334859.2
hypothetical proteinLK445_00735Not AvailableNegative196138 - 1964159940.45

Displaying genes 5251 – 5260 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.