Burkholderia dolosa PC688, R-3073

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia dolosa PC688, designated as R-3073, is a Gram-negative bacterium characterized by its rod shape and aerobic metabolic requirements. This organism is motile, which may facilitate its interactions within diverse environments. Genetically, Burkholderia dolosa PC688 possesses three replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various ecological niches. The presence of multiple replicons can provide advantages such as increased genetic diversity and the capacity to acquire and maintain plasmids, which may harbor beneficial traits for environmental resistance or pathogenicity. The specific accessions associated with Burkholderia dolosa PC688 are CP086006.1, CP086005.1, and CP086004.1, reflecting its sequenced genomic data. Such genomic insights are essential for understanding the organism's biological functions and potential applications in biotechnology or medicine. This bacterium is part of the Burkholderia genus, which is known for its environmental versatility and interactions with plants and other microorganisms. The ecological role of Burkholderia dolosa PC688 may involve its participation in nutrient cycling or its interactions with other species in its habitat, highlighting the importance of studying such organisms in understanding microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia dolosa
StrainPC688, R-3073

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia dolosa PC688, R-3073, Chromosome

Gene Summary

Adenine Count

563872 bp

Thymine Count

566031 bp

Guanine Count

1138075 bp

Cytosine Count

1140912 bp

Genome Length

3408990 bp

Protein-coding Genes

3050 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dmt family transporterLK445_11095Not AvailablePositive1747712 - 174854829441.7
plp-dependent aminotransferase family proteinLK445_11100P49309Negative1748657 - 175016554605.5
4-aminobutyrate--2-oxoglutarate transaminaseLK445_11105P50457Positive1750292 - 175157545448.1
nadp-dependent succinate-semialdehyde dehydrogenaseLK445_11110Q9I6M5Positive1751653 - 175312251688.0
methyl-accepting chemotaxis proteinLK445_11115P50466Negative1753244 - 175478855126.3
hypothetical proteinLK445_11120Not AvailableNegative1755176 - 175555013849.7
3-oxoadipyl-coa thiolaseLK445_11125Q51956Negative1755846 - 175704841820.4
iclr family transcriptional regulatorLK445_11130Q52154Positive1757306 - 175809128549.6
m14 family metallopeptidaseLK445_11135Not AvailableNegative1758301 - 175941639883.9
transporter substrate-binding domain-containing proteinLK445_11140P02911Negative1759464 - 176023727955.7

Displaying genes 4731 – 4740 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.