Burkholderia dolosa PC688, R-3073

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia dolosa PC688, designated as R-3073, is a Gram-negative bacterium characterized by its rod shape and aerobic metabolic requirements. This organism is motile, which may facilitate its interactions within diverse environments. Genetically, Burkholderia dolosa PC688 possesses three replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various ecological niches. The presence of multiple replicons can provide advantages such as increased genetic diversity and the capacity to acquire and maintain plasmids, which may harbor beneficial traits for environmental resistance or pathogenicity. The specific accessions associated with Burkholderia dolosa PC688 are CP086006.1, CP086005.1, and CP086004.1, reflecting its sequenced genomic data. Such genomic insights are essential for understanding the organism's biological functions and potential applications in biotechnology or medicine. This bacterium is part of the Burkholderia genus, which is known for its environmental versatility and interactions with plants and other microorganisms. The ecological role of Burkholderia dolosa PC688 may involve its participation in nutrient cycling or its interactions with other species in its habitat, highlighting the importance of studying such organisms in understanding microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia dolosa
StrainPC688, R-3073

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia dolosa PC688, R-3073, Chromosome

Gene Summary

Adenine Count

563872 bp

Thymine Count

566031 bp

Guanine Count

1138075 bp

Cytosine Count

1140912 bp

Genome Length

3408990 bp

Protein-coding Genes

3050 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinLK445_03895Not AvailablePositive85965 - 8642017933.4
hypothetical proteinLK445_03900Not AvailablePositive86408 - 8736734790.5
flim/flin family flagellar motor switch proteinLK445_03905P0A1K7Positive87364 - 8829934620.5
escr/yscr/hrcr family type iii secretion system export apparatus proteinLK445_03910Q56023Positive88292 - 8895724134.9
escs/yscs/hrcs family type iii secretion system export apparatus proteinLK445_03915P0A1L9Positive88957 - 892118848.27
spar/ysct/hrct type iii secretion system export apparatus proteinLK445_03920P40701Positive89219 - 8998927316.8
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinLK445_03925P40702Positive89993 - 9117143763.8
type iii secretion system translocator chaperone sicaLK445_03930P69064Positive91255 - 9175219084.7
type iii secretion system translocon subunit scteLK445_03935P18011Positive91745 - 9335856456.1
ipac/sipc family type iii secretion system effectorLK445_03940Not AvailablePositive93414 - 9460742446.3

Displaying genes 3291 – 3300 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.