Burkholderia dolosa PC688, R-3073

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia dolosa PC688, designated as R-3073, is a Gram-negative bacterium characterized by its rod shape and aerobic metabolic requirements. This organism is motile, which may facilitate its interactions within diverse environments. Genetically, Burkholderia dolosa PC688 possesses three replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various ecological niches. The presence of multiple replicons can provide advantages such as increased genetic diversity and the capacity to acquire and maintain plasmids, which may harbor beneficial traits for environmental resistance or pathogenicity. The specific accessions associated with Burkholderia dolosa PC688 are CP086006.1, CP086005.1, and CP086004.1, reflecting its sequenced genomic data. Such genomic insights are essential for understanding the organism's biological functions and potential applications in biotechnology or medicine. This bacterium is part of the Burkholderia genus, which is known for its environmental versatility and interactions with plants and other microorganisms. The ecological role of Burkholderia dolosa PC688 may involve its participation in nutrient cycling or its interactions with other species in its habitat, highlighting the importance of studying such organisms in understanding microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia dolosa
StrainPC688, R-3073

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia dolosa PC688, R-3073, Chromosome

Gene Summary

Adenine Count

563872 bp

Thymine Count

566031 bp

Guanine Count

1138075 bp

Cytosine Count

1140912 bp

Genome Length

3408990 bp

Protein-coding Genes

3050 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutathione s-transferase n-terminal domain-containing proteinLK445_28135P0ACA2Negative3216400 - 321701122759.4
aminopeptidase p n-terminal domain-containing proteinLK445_28140P15034Positive3217198 - 321859550745.1
ubih/ubif/visc/coq6 family ubiquinone biosynthesis hydroxylaseLK445_28145P25534Positive3218643 - 321983041630.8
trna dihydrouridine synthase dusbLK445_28150Q88DK5Positive3219972 - 322103938470.0
fis family transcriptional regulatorLK445_28155Q8Y231Positive3221036 - 32212698791.58
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseLK445_28160A9AH70Positive3221314 - 322287955639.4
crossover junction endodeoxyribonuclease ruvcLK445_28165A0K4L6Positive3223031 - 322357318628.9
holliday junction branch migration protein ruvaLK445_28170A4JBL3Positive3223692 - 322427320396.2
holliday junction branch migration dna helicase ruvbLK445_28175A9AH73Positive3224381 - 322544839043.1
oxygenase mpab family proteinLK445_28180Not AvailablePositive3225473 - 322642334119.3

Displaying genes 3031 – 3040 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.