Burkholderia dolosa PC688, R-3073

rodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia dolosa PC688, designated as R-3073, is a Gram-negative bacterium characterized by its rod shape and aerobic metabolic requirements. This organism is motile, which may facilitate its interactions within diverse environments. Genetically, Burkholderia dolosa PC688 possesses three replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in various ecological niches. The presence of multiple replicons can provide advantages such as increased genetic diversity and the capacity to acquire and maintain plasmids, which may harbor beneficial traits for environmental resistance or pathogenicity. The specific accessions associated with Burkholderia dolosa PC688 are CP086006.1, CP086005.1, and CP086004.1, reflecting its sequenced genomic data. Such genomic insights are essential for understanding the organism's biological functions and potential applications in biotechnology or medicine. This bacterium is part of the Burkholderia genus, which is known for its environmental versatility and interactions with plants and other microorganisms. The ecological role of Burkholderia dolosa PC688 may involve its participation in nutrient cycling or its interactions with other species in its habitat, highlighting the importance of studying such organisms in understanding microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia dolosa
StrainPC688, R-3073

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia dolosa PC688, R-3073


Gene Summary

Adenine Count

563872 bp

Thymine Count

566031 bp

Guanine Count

1138075 bp

Cytosine Count

1140912 bp

Genome Length

3408990 bp

Protein-coding Genes

3050 genes

Non-Coding Genes

160 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hit family proteinLK445_17540P9WMK8Positive966533 - 96697616841.0
duf971 domain-containing proteinLK445_17545Not AvailablePositive966973 - 96738614954.6
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieLK445_17550A9AFC0Positive967439 - 96817027079.7
39s ribosomal protein l45LK445_17555Not AvailablePositive968212 - 96923736086.6
scp2 sterol-binding domain-containing proteinLK445_17560Not AvailablePositive969400 - 97002622524.8
ubiquinone biosynthesis regulatory protein kinase ubibLK445_17565A3MNU1Positive970039 - 97161659912.1
tpmt family class i sam-dependent methyltransferaseLK445_17570A4XVB5Positive971634 - 97226022887.0
zinc ribbon domain-containing proteinLK445_17575Not AvailablePositive972357 - 97268610606.2
duf502 domain-containing proteinLK445_17580Q8VY49Positive972748 - 97339823469.3
aspartate--trna ligaseLK445_17585A9AFC7Positive973466 - 97526867746.1

Displaying genes 1021 – 1030 of 5811 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.