Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primary-amine oxidase | RC54_15395 | P80695 | Negative | 3444771 - 3447044 | 84141.2 |
| porin | RC54_15400 | P24305 | Negative | 3447479 - 3448600 | 38987.9 |
| abc transporter permease | RC54_15405 | Q68XW4 | Positive | 3448870 - 3450033 | 41342.2 |
| abc transporter atp-binding protein | RC54_15410 | P45031 | Positive | 3450027 - 3450884 | 30221.3 |
| mce family protein | RC54_15415 | P29285 | Positive | 3450884 - 3451801 | 32198.8 |
| abc transporter | RC54_15420 | P29285 | Positive | 3451798 - 3452418 | 22068.6 |
| lysr family transcriptional regulator | RC54_15425 | P43011 | Positive | 3452523 - 3453434 | 33899.8 |
| lrgb family protein | RC54_15430 | P0AD19 | Negative | 3453445 - 3454185 | 25940.6 |
| cida/lrga family protein | RC54_15435 | A8GC34 | Negative | 3454185 - 3454565 | 13088.6 |
| hypothetical protein | RC54_15440 | Not Available | Positive | 3455002 - 3455868 | 31671.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



