Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | RC54_14345 | Not Available | Negative | 3207423 - 3208262 | 30198.6 |
| squalene synthase hpnd | RC54_14350 | O07333 | Positive | 3208601 - 3209434 | 31693.3 |
| phytoene dehydrogenase | RC54_14355 | Q6N3F3 | Positive | 3209455 - 3210786 | 47155.1 |
| alpha-hydroxy-acid oxidizing protein | RC54_14360 | B0T7X2 | Positive | 3210982 - 3212124 | 40964.9 |
| ankyrin repeat domain-containing protein | RC54_14365 | Q3U0L2 | Negative | 3212214 - 3212885 | 24499.8 |
| tatd family deoxyribonuclease | RC54_14370 | P0AFQ9 | Negative | 3212882 - 3213661 | 28843.3 |
| dna-binding response regulator | RC54_14375 | P42508 | Negative | 3213748 - 3214296 | 19861.7 |
| sensor histidine kinase | RC54_14380 | P0C0Z0 | Negative | 3214381 - 3215718 | 47856.6 |
| dna polymerase iii subunit delta' | RC54_14385 | P52024 | Negative | 3215764 - 3216801 | 38158.9 |
| dtmp kinase | RC54_14390 | A6SZH9 | Negative | 3216811 - 3217419 | 22884.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



