Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RC54_13745 | Not Available | Negative | 3071831 - 3073168 | 47666.8 |
| nucleotide excision repair endonuclease | RC54_13750 | Q8XDZ7 | Negative | 3073313 - 3074404 | 40391.9 |
| dna ligase d | RC54_13755 | Q9I1X7 | Negative | 3074571 - 3077156 | 95206.7 |
| ku protein | RC54_13760 | Q0JYN7 | Negative | 3077153 - 3078142 | 36838.0 |
| pyruvate dehydrogenase | RC54_13765 | P07003 | Positive | 3078387 - 3080081 | 60196.3 |
| hypothetical protein | RC54_13770 | Not Available | Positive | 3080084 - 3080341 | 9758.3 |
| hypothetical protein | RC54_13775 | Not Available | Positive | 3080487 - 3080717 | 8432.3 |
| (2fe-2s)-binding protein | RC54_13780 | Not Available | Positive | 3080881 - 3080991 | 3685.05 |
| hypothetical protein | RC54_13785 | Not Available | Negative | 3081154 - 3081402 | 9722.93 |
| duf4142 domain-containing protein | RC54_13790 | Not Available | Negative | 3081525 - 3082100 | 20624.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



