Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylaconitate cis-trans isomerase prpf | RC54_13645 | Q937N7 | Positive | 3047272 - 3048462 | 41616.9 |
| d-lactate dehydrogenase | RC54_13650 | P06149 | Negative | 3048476 - 3050152 | 62163.4 |
| abc transporter permease | RC54_13655 | P36948 | Negative | 3050181 - 3051191 | 35394.9 |
| sugar abc transporter atp-binding protein | RC54_13660 | Q8UBN2 | Negative | 3051226 - 3052749 | 55256.1 |
| sugar abc transporter substrate-binding protein | RC54_13665 | P0A2C6 | Negative | 3052785 - 3053864 | 39607.4 |
| ribose-5-phosphate isomerase rpia | RC54_13670 | Q8ZGJ9 | Negative | 3054031 - 3054744 | 26173.5 |
| murr/rpir family transcriptional regulator | RC54_13675 | O68281 | Negative | 3054800 - 3055639 | 30874.2 |
| phosphoglycolate phosphatase | RC54_13680 | A3PNX3 | Negative | 3055636 - 3056352 | 25680.7 |
| xylulokinase | RC54_13685 | P09099 | Negative | 3056349 - 3057878 | 53844.5 |
| nad-dependent succinate-semialdehyde dehydrogenase | RC54_13690 | Q6F9G0 | Negative | 3057881 - 3059347 | 51535.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



