Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein | RC54_13595 | Q57951 | Negative | 3036722 - 3037159 | 15421.0 |
| n-formylglutamate deformylase | RC54_13600 | O31201 | Negative | 3037379 - 3038179 | 29355.1 |
| formimidoylglutamate deiminase | RC54_13605 | Q9HU77 | Negative | 3038192 - 3039637 | 52325.5 |
| hypothetical protein | RC54_13610 | A7MNV4 | Negative | 3039753 - 3040412 | 23756.4 |
| amino acid abc transporter atp-binding protein | RC54_13615 | P54537 | Negative | 3040402 - 3041175 | 27663.9 |
| amino acid abc transporter permease | RC54_13620 | P54536 | Negative | 3041175 - 3041840 | 24523.1 |
| glutamine abc transporter substrate-binding protein | RC54_13625 | P0AEQ5 | Negative | 3041996 - 3042757 | 27907.9 |
| iclr family transcriptional regulator | RC54_13630 | Q0K846 | Negative | 3042878 - 3043615 | 26755.5 |
| gntr family transcriptional regulator | RC54_13635 | Q8GAL4 | Positive | 3043878 - 3044600 | 27001.2 |
| fe/s-dependent 2-methylisocitrate dehydratase acnd | RC54_13640 | Q937N8 | Positive | 3044654 - 3047275 | 95610.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



