Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | RC54_12995 | P09746 | Negative | 2909397 - 2910803 | 48373.8 |
| hypothetical protein | RC54_13000 | Not Available | Negative | 2910905 - 2911402 | 17727.1 |
| pilus assembly protein | RC54_13005 | P33553 | Negative | 2911514 - 2912080 | 19380.2 |
| type ii secretion system protein f | RC54_13010 | A5F382 | Negative | 2912103 - 2913182 | 40208.1 |
| secretion system protein e | RC54_13015 | P37093 | Negative | 2913169 - 2914788 | 59138.4 |
| type iv pilus biogenesis protein pilp | RC54_13020 | Not Available | Negative | 2914785 - 2915288 | 17824.6 |
| pilus assembly protein | RC54_13025 | Not Available | Negative | 2915278 - 2916543 | 47240.8 |
| piln family type ivb pilus formation outer membrane protein | RC54_13030 | Q9S142 | Negative | 2916561 - 2918282 | 59496.7 |
| toxin | RC54_13035 | Not Available | Negative | 2918282 - 2918830 | 19155.6 |
| escc/yscc/hrcc family type iii secretion system outer membrane ring protein | RC54_13040 | Q01723 | Negative | 2919243 - 2921348 | 73606.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



