Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RC54_12495 | Not Available | Negative | 2808597 - 2808953 | 13430.8 |
| hypothetical protein | RC54_12500 | Not Available | Positive | 2808982 - 2809269 | 10640.7 |
| spor domain-containing protein | RC54_12505 | Not Available | Negative | 2809288 - 2809830 | 17853.9 |
| sigma-54-dependent fis family transcriptional regulator | RC54_12510 | P12626 | Negative | 2809847 - 2810824 | 36517.7 |
| hoxn/hupn/nixa family nickel/cobalt transporter | RC54_12515 | P23516 | Positive | 2811611 - 2812678 | 39390.2 |
| nickel-responsive transcriptional regulator nikr | RC54_12520 | B2SAM1 | Positive | 2812732 - 2813211 | 17889.3 |
| alpha/beta hydrolase | RC54_12525 | Not Available | Negative | 2813266 - 2814246 | 37329.8 |
| duf2946 domain-containing protein | RC54_12530 | Not Available | Negative | 2814553 - 2814966 | 14225.4 |
| copper resistance protein copd | RC54_12535 | P12377 | Negative | 2815095 - 2815979 | 31990.8 |
| cu resistance protein | RC54_12540 | P0AA58 | Negative | 2815976 - 2816341 | 12725.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



