Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum rubrisubalbicans |
| Strain | B579 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082625 bp
Thymine Count
1080380 bp
Guanine Count
1727574 bp
Cytosine Count
1727014 bp
Genome Length
5617593 bp
Protein-coding Genes
4817 genes
Non-Coding Genes
177 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | RC54_11655 | O80472 | Negative | 2581902 - 2582621 | 25472.6 |
| plp-dependent aminotransferase family protein | RC54_11660 | Q01856 | Positive | 2582771 - 2584174 | 51256.0 |
| lysr family transcriptional regulator | RC54_11665 | Q08597 | Positive | 2584249 - 2585190 | 33296.8 |
| fad-dependent tricarballylate dehydrogenase tcua | RC54_11670 | P83223 | Positive | 2585281 - 2586690 | 51026.6 |
| tricarballylate utilization protein tcub | RC54_11675 | P37463 | Positive | 2586677 - 2587912 | 44211.1 |
| mfs transporter | RC54_11680 | P16482 | Positive | 2588025 - 2589326 | 46489.9 |
| hypothetical protein | RC54_11685 | P65319 | Negative | 2589351 - 2590178 | 29853.2 |
| dna polymerase ii | RC54_11690 | P21189 | Positive | 2590340 - 2592748 | 90608.5 |
| hypothetical protein | RC54_11695 | Not Available | Negative | 2592862 - 2593059 | 7521.15 |
| mfs transporter | RC54_11700 | P28246 | Negative | 2593126 - 2594367 | 44391.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.



